DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37b and kcna6a

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_001124098.1 Gene:kcna6a / 795490 ZFINID:ZDB-GENE-080722-21 Length:475 Species:Danio rerio


Alignment Length:38 Identity:12/38 - (31%)
Similarity:16/38 - (42%) Gaps:11/38 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREGG 82
            |.|..||.:||           |:.|.:..|..:||.|
Zfish   293 RIFKLSRHSKG-----------LQILGQTLRASMRELG 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 12/38 (32%)
kcna6aNP_001124098.1 BTB 33..122 CDD:197585
BTB_2 33..121 CDD:280393
Ion_trans 211..411 CDD:278921 12/38 (32%)
Ion_trans_2 <350..401 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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