DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37b and kcnb2b

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:XP_695259.4 Gene:kcnb2b / 566883 ZFINID:ZDB-GENE-091113-38 Length:831 Species:Danio rerio


Alignment Length:70 Identity:14/70 - (20%)
Similarity:26/70 - (37%) Gaps:19/70 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TSFGK-----RHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMR 65
            |..||     .|:....:|     ..|.|.:::.....:|.|.|...|:.|         ||::.
Zfish    59 TRLGKLRDCNTHDSLMEVC-----DDYCLNENEYFFDRHPGAFTSILNFYR---------TGKLH 109

  Fly    66 YLKNL 70
            .::.:
Zfish   110 MMEEM 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 14/70 (20%)
kcnb2bXP_695259.4 BTB 37..143 CDD:197585 14/70 (20%)
BTB_2 37..136 CDD:280393 14/70 (20%)
Ion_trans 231..429 CDD:278921
Ion_trans_2 342..423 CDD:285168
Kv2channel 480..706 CDD:281514
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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