DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and Kcna5

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_037104.1 Gene:Kcna5 / 25470 RGDID:2953 Length:602 Species:Rattus norvegicus


Alignment Length:38 Identity:11/38 - (28%)
Similarity:16/38 - (42%) Gaps:11/38 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREGG 82
            |.|..||.:||           |:.|.:..:..:||.|
  Rat   398 RIFKLSRHSKG-----------LQILGKTLQASMRELG 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 11/38 (29%)
Kcna5NP_037104.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..107
BTB 113..207 CDD:197585
BTB_2 113..204 CDD:280393
Ion_trans 305..515 CDD:278921 11/38 (29%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 407..420 4/23 (17%)
Ion_trans_2 429..506 CDD:285168
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 469..474
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..543
PDZ-binding 600..602
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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