DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and Kcna4

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_037103.2 Gene:Kcna4 / 25469 RGDID:2952 Length:654 Species:Rattus norvegicus


Alignment Length:38 Identity:12/38 - (31%)
Similarity:15/38 - (39%) Gaps:11/38 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREGG 82
            |.|..||.:||           |:.|....|..:||.|
  Rat   454 RIFKLSRHSKG-----------LQILGHTLRASMRELG 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 12/38 (32%)
Kcna4NP_037103.2 K_channel_TID 1..>37 CDD:400339
BTB_POZ 177..304 CDD:365784
Ion_trans 307..571 CDD:395416 12/38 (32%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 463..476 5/23 (22%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 525..530
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..654
PDZ-binding 652..654
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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