DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-2 and Kcna4

DIOPT Version :10

Sequence 1:NP_611757.1 Gene:RpL37-2 / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_037103.2 Gene:Kcna4 / 25469 RGDID:2952 Length:654 Species:Rattus norvegicus


Alignment Length:38 Identity:12/38 - (31%)
Similarity:15/38 - (39%) Gaps:11/38 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREGG 82
            |.|..||.:||           |:.|....|..:||.|
  Rat   454 RIFKLSRHSKG-----------LQILGHTLRASMRELG 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-2NP_611757.1 PTZ00073 1..89 CDD:240257 12/38 (32%)
Kcna4NP_037103.2 K_channel_TID 1..>37 CDD:429748
BTB_POZ 177..304 CDD:453885
Ion_trans 307..571 CDD:459842 12/38 (32%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 463..476 5/23 (22%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 525..530
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..654
PDZ-binding. /evidence=ECO:0000269|PubMed:7477295 652..654
Blue background indicates that the domain is not in the aligned region.

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