DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and shw-3

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_001355445.1 Gene:shw-3 / 191761 WormBaseID:WBGene00004793 Length:500 Species:Caenorhabditis elegans


Alignment Length:9 Identity:5/9 - (55%)
Similarity:7/9 - (77%) Gaps:0/9 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NLRRRFRNG 77
            ::|||..||
 Worm     2 SIRRRNNNG 10

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 5/9 (56%)
shw-3NP_001355445.1 BTB_POZ 25..136 CDD:365784
Ion_trans 257..444 CDD:366146
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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