DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-2 and shl-1

DIOPT Version :10

Sequence 1:NP_611757.1 Gene:RpL37-2 / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_500975.2 Gene:shl-1 / 177400 WormBaseID:WBGene00022240 Length:578 Species:Caenorhabditis elegans


Alignment Length:29 Identity:10/29 - (34%)
Similarity:18/29 - (62%) Gaps:3/29 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TRSFNWSRKAKGRKAQGTGRM---RYLKN 69
            :|.::.:::|..||||...|:   |.:||
 Worm   411 SRIYHQNQRADKRKAQKKARLARIRIVKN 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-2NP_611757.1 PTZ00073 1..89 CDD:240257 10/29 (34%)
shl-1NP_500975.2 BTB_POZ 6..149 CDD:453885
Ion_trans 187..416 CDD:459842 1/4 (25%)
DUF3399 472..>511 CDD:463381
Blue background indicates that the domain is not in the aligned region.

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