DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37-2 and Kcng3

DIOPT Version :10

Sequence 1:NP_611757.1 Gene:RpL37-2 / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_596917.2 Gene:Kcng3 / 171011 RGDID:628832 Length:433 Species:Rattus norvegicus


Alignment Length:90 Identity:19/90 - (21%)
Similarity:33/90 - (36%) Gaps:22/90 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SFG------KRHNKTHTICRRCGNSSY-----------HLQKSKCSQCGYPAAKTRSFNWSRKAK 54
            :||      :.|.|.....|.|..|.|           ||:.....:.....:.|.:|:.:.:..
  Rat    69 AFGFILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTHTFHAAEELG 133

  Fly    55 GRKAQGTG-----RMRYLKNLRRRF 74
            ..:.:.||     ..|:|:.:||.|
  Rat   134 REQPRPTGPEAAPSRRWLERMRRTF 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-2NP_611757.1 PTZ00073 1..89 CDD:240257 19/90 (21%)
Kcng3NP_596917.2 BTB_POZ_KCNG3 11..122 CDD:349729 10/52 (19%)
Ion_trans 210..417 CDD:459842
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.