DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and Kcnb1

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_032446.2 Gene:Kcnb1 / 16500 MGIID:96666 Length:857 Species:Mus musculus


Alignment Length:67 Identity:17/67 - (25%)
Similarity:29/67 - (43%) Gaps:13/67 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TSFGK-RHNKTH-TICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLK 68
            |..|| |...|| ::.:.|  ..|.|:.::.....:|.|.|...|:.|         |||:..::
Mouse    55 TRLGKLRDCNTHDSLLQVC--DDYSLEDNEYFFDRHPGAFTSILNFYR---------TGRLHMME 108

  Fly    69 NL 70
            .:
Mouse   109 EM 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 17/67 (25%)
Kcnb1NP_032446.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
BTB_POZ_KCNB2 15..141 CDD:349719 17/67 (25%)
Self-association. /evidence=ECO:0000250|UniProtKB:P15387 59..75 5/17 (29%)
Ion_trans 188..424 CDD:366146
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 377..382
Self-association. /evidence=ECO:0000250|UniProtKB:P15387 448..481
Kv2channel 467..678 CDD:367541
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..569
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..627
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..802
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 816..857
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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