DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and Kcnq3

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_690887.2 Gene:Kcnq3 / 110862 MGIID:1336181 Length:873 Species:Mus musculus


Alignment Length:11 Identity:5/11 - (45%)
Similarity:6/11 - (54%) Gaps:0/11 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NLRRRFRNGLR 79
            |.:.|||...|
Mouse   468 NNKERFRTAFR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 5/11 (45%)
Kcnq3NP_690887.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
Ion_trans 140..364 CDD:278921
Ion_trans_2 270..354 CDD:285168
Selectivity filter. /evidence=ECO:0000250 317..322
Mediates interaction with calmodulin. /evidence=ECO:0000250|UniProtKB:O43525 357..538 5/11 (45%)
KCNQ_channel 453..657 CDD:281513 5/11 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..603
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 723..742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 766..873
KCNQC3-Ank-G_bd 781..867 CDD:288784
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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