DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and kcnc1b

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:XP_005174318.1 Gene:kcnc1b / 100334453 ZFINID:ZDB-GENE-080414-3 Length:598 Species:Danio rerio


Alignment Length:51 Identity:14/51 - (27%)
Similarity:19/51 - (37%) Gaps:17/51 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KRHNK---------THTICRRCGNS---SYH-----LQKSKCSQCGYPAAK 43
            |:.||         :...||...||   |.|     |.:.:.|:..||..|
Zfish   453 KKKNKHIRRPPLLGSPNYCRSAVNSPRPSTHSDTCPLAQEEVSEIRYPDFK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 14/51 (27%)
kcnc1bXP_005174318.1 BTB 10..112 CDD:197585
BTB_2 10..104 CDD:280393
Ion_trans 230..446 CDD:278921
Ion_trans_2 <389..436 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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