DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-2 and kcnd1

DIOPT Version :10

Sequence 1:NP_611757.1 Gene:RpL37-2 / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_001119942.1 Gene:kcnd1 / 100001681 ZFINID:ZDB-GENE-081105-40 Length:632 Species:Danio rerio


Alignment Length:44 Identity:12/44 - (27%)
Similarity:18/44 - (40%) Gaps:10/44 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KGTTSF-------GKRHNKTH--TICRRCGNSSYHLQKSKCSQC 37
            ||||:.       |..|::.|  .:|.: ..||:..|......|
Zfish   438 KGTTNAFLQYKEEGGFHDRDHDGALCLK-NRSSFEHQHHHLLHC 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-2NP_611757.1 PTZ00073 1..89 CDD:240257 12/44 (27%)
kcnd1NP_001119942.1 BTB_POZ_KCND1 6..143 CDD:349724
Ion_trans 184..415 CDD:459842
DUF3399 466..542 CDD:463381 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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