DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and HB16

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_195716.1 Gene:HB16 / 830169 AraportID:AT4G40060 Length:294 Species:Arabidopsis thaliana


Alignment Length:71 Identity:26/71 - (36%)
Similarity:39/71 - (54%) Gaps:8/71 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 GGHH----SRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRA 170
            |.||    |.|.||.:..    |:.||||.||..:..:...:.:||.::.|...:|.||||||||
plant    49 GNHHHMGLSEKKRRLKVD----QVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRA 109

  Fly   171 KFRRNE 176
            :::..:
plant   110 RWKTKQ 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 21/55 (38%)
HB16NP_195716.1 Homeodomain 59..112 CDD:459649 22/56 (39%)
HALZ 114..155 CDD:460477 0/2 (0%)

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