DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Isx

DIOPT Version :9

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_008770554.1 Gene:Isx / 682968 RGDID:1592776 Length:242 Species:Rattus norvegicus


Alignment Length:246 Identity:79/246 - (32%)
Similarity:105/246 - (42%) Gaps:83/246 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNF 86
            |||:..:|..|  |...|:.:||      |.:      ||::.|:          |...|..:..
  Rat     3 GPTIQRDIEKS--SGYCEAPEKL------GLS------FSIEAIL----------KRPTERRNLP 43

  Fly    87 GPTGAGCGGADRPAPCSGNLPAGGGHHSRKP------------RRNRTTFSSAQLTALEKVFERT 139
            .|...| ||..|....||:       ...||            ||.||||::.||..|||:|..|
  Rat    44 RPQSIG-GGDSRQTTTSGS-------KLEKPTQDQPQEERKNKRRVRTTFTTEQLQELEKLFHFT 100

  Fly   140 HYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERS--------VGSRT------------- 183
            ||||..||.:||::::|.|||||:||||:|||:|:.|:|        .||.|             
  Rat   101 HYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEKSGSLSAPQQPGSCTDAHCSAHIGATHR 165

  Fly   184 ----LLDTAP-QLVPAPISN-------------NMHKYANMPHPHPQPPPP 216
                |.|:|. :|||.|.|.             ..|..|..|:.||..|.|
  Rat   166 MLPPLSDSARFKLVPCPDSPCPMAPMGPAAPAWPSHPAALCPYLHPPTPKP 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeobox 121..173 CDD:278475 32/51 (63%)
IsxXP_008770554.1 Homeobox 82..134 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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