Protein Alignment CG9876 and Isx

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001387929.1
• Gene: Isx / 682968
• RGDID: 1592776
• Length: 242
• Species: Rattus norvegicus
• Alignment Length: 246
• Identity: 79/246 - (32%)
• Similarity: 105/246 - (42%)
• Gaps: 83/246 - (33%)

  Fly    22 GPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNF 86
            |||:..:|..|  |...|:.:||      |.:      ||::.|:          |...|..:..
  Rat     3 GPTIQRDIEKS--SGYCEAPEKL------GLS------FSIEAIL----------KRPTERRNLP 43

  Fly    87 GPTGAGCGGADRPAPCSGNLPAGGGHHSRKP------------RRNRTTFSSAQLTALEKVFERT 139
            .|...| ||..|....||:       ...||            ||.||||::.||..|||:|..|
  Rat    44 RPQSIG-GGDSRQTTTSGS-------KLEKPTQDQPQEERKNKRRVRTTFTTEQLQELEKLFHFT 100

  Fly   140 HYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERS--------VGSRT------------- 183
            ||||..||.:||::::|.|||||:||||:|||:|:.|:|        .||.|
  Rat   101 HYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEKSGSLSAPQQPGSCTDAHCSAHIGATHR 165

  Fly   184 ----LLDTAP-QLVPAPISN-------------NMHKYANMPHPHPQPPPP 216
                |.|:|. :|||.|.|.             ..|..|..|:.||..|.|
  Rat   166 MLPPLSDSARFKLVPCPDSPCPMAPMGPAAPAWPSHPAALCPYLHPPTPKP 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	34/55 (62%)
Isx	NP_001387929.1	Homeodomain	79..135	CDD:459649	34/55 (62%)