Protein Alignment CG9876 and shox

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: XP_005167911.1
• Gene: shox / 664748
• ZFINID: ZDB-GENE-051030-21
• Length: 304
• Species: Danio rerio
• Alignment Length: 225
• Identity: 71/225 - (31%)
• Similarity: 92/225 - (40%)
• Gaps: 73/225 - (32%)

  Fly    40 SEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFGPTGAGCG---------- 94
            ||..|::..|:..|...:|.:.       :|....|.|:     ..|..|.|..|
Zfish    43 SETNLQEITETNNNHCPVHLYK-------EHVELEKEKL-----KEFSVTRASDGIYDCKDKKED 95

  Fly    95 --GADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLS 157
              ..|..|           ....|.||:||.|:..||..||::|:.|||||||:||||:.::.||
Zfish    96 VKSEDEDA-----------QSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 149

  Fly   158 EARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPAPISNNMHKYANM---------------- 206
            ||||||||||||||.|:.|..:....:|.||..|....::    .|.||
Zfish   150 EARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVA----PYVNMGALRMPFQQVQAQLQL 210

  Fly   207 --------PHPHPQ----------PPPPPG 218
                    ||.||.          ||||.|
Zfish   211 EGVGTHSHPHLHPHLAAHAPYLMFPPPPFG 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	37/55 (67%)
shox	XP_005167911.1	SCP-1	<1..>145	CDD:114219	37/124 (30%)
		Homeodomain	110..166	CDD:459649	37/55 (67%)