DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and hoxb5b

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:178 Identity:40/178 - (22%)
Similarity:66/178 - (37%) Gaps:42/178 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLPVGNPGNFYYGPTVSGEIYSSHQSHNLES-EDKLEDREESGRNLDKIHRFSVDNIMEMKHDAY 73
            |.|.||.     ..|.|..:.||:.:|..:: |..:....|.|.......|......:.......
Zfish   116 STPTGNS-----RLTNSNNLTSSNSTHFADTDETNVSSETEEGAQTTTTSRTQKQESVATSTTTP 175

  Fly    74 SKGK--------MAMELSSNF-GPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQL 129
            :.|:        ..:.:|.:. ||.|                           :|.||.::..|.
Zfish   176 NDGQTPQIFPWMRKLHISHDMTGPDG---------------------------KRARTAYTRYQT 213

  Fly   130 TALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER 177
            ..|||.|....|.....|.|:|..:.|||.::::||||||.|::::.:
Zfish   214 LELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 22/55 (40%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 14/70 (20%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeodomain 202..258 CDD:459649 22/55 (40%)

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