DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and CG34367

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster


Alignment Length:273 Identity:86/273 - (31%)
Similarity:120/273 - (43%) Gaps:71/273 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFGPTGAGCGGADR- 98
            |.:|:.:.:.||.:.||        ....:|.|...|: :..|:|                .|: 
  Fly   123 SEDLDVDSQPEDPKMSG--------LPTASITECTEDS-NTPKLA----------------PDKP 162

  Fly    99 --PAPCSGNLPAGGGHH---------SRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELAT 152
              |..|....|:....|         :.|.||:||.|:..||..||::||.|||||||:||||:.
  Fly   163 LLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQ 227

  Fly   153 KVHLSEARVQVWFQNRRAKFRRNERS------VGSRTLLDTAPQLVP---AP-ISNNMHKYANMP 207
            ::.||||||||||||||||.|::|..      ||||:.....| |.|   || :|....:.:::|
  Fly   228 RLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATP-LEPCRVAPYVSLAALRSSSVP 291

  Fly   208 -HP------HPQPPPPPGAYAL----------NFGPLELRSCQNYTNCYGGFGSSGASGSGVCSF 255
             ||      :||.|...|..:.          |..|...||....      |.|:.|:.:...:|
  Fly   292 SHPAAATSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAIKQ------FSSTVAAAAAFSAF 350

  Fly   256 FGATNYCVAANYA 268
            ..|.....|..||
  Fly   351 DPAIISVAAHQYA 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 38/55 (69%)
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 38/55 (69%)
OAR 392..410 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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