DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Drgx

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:179 Identity:63/179 - (35%)
Similarity:82/179 - (45%) Gaps:41/179 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER-- 177
            ||.|||||||:..||..||..|.:|||||.|.||:||.|::|:||||||||||||||:|:.||  
  Fly    50 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLK 114

  Fly   178 --------SVGSRTL--------------------LDTAP--QLVPAPISN-NMHKYANMPHPHP 211
                    ...|.:|                    :|..|  |...:|::| .|.:..:..|.|.
  Fly   115 DEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHSHS 179

  Fly   212 QPPPPPGAYAL----NFGPLELRSC----QNYTNCYGGFGSSGASGSGV 252
            ....|.|...|    |..||.....    .:.:...|...:...|.||:
  Fly   180 HSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGM 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 38/55 (69%)
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 38/55 (69%)
OAR 428..446 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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