DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and meox2a

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:131 Identity:42/131 - (32%)
Similarity:55/131 - (41%) Gaps:42/131 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 SSNFGPTGAG-CG-----GADRP--APCSGNLPAGG-GHH------------------------- 113
            ||:.||.|.. |.     ||..|  |.|   :|.|. |.|                         
Zfish   117 SSDVGPGGPSLCASTPSLGAGVPSGASC---VPGGDFGRHTMSPAEAEKRNSKRRSDSSESQDGN 178

  Fly   114 -----SRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFR 173
                 |.|||:.||.|:..|:..||..|...:|.....|.|:|..:.|:|.:|:|||||||.|::
Zfish   179 YKSDVSSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243

  Fly   174 R 174
            |
Zfish   244 R 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 23/55 (42%)
meox2aXP_017206696.1 Homeodomain 188..244 CDD:459649 23/55 (42%)

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