Protein Alignment CG9876 and nkx3.3

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 211
• Identity: 55/211 - (26%)
• Similarity: 77/211 - (36%)
• Gaps: 58/211 - (27%)

  Fly    28 EIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFGPTGAG 92
            |..||.| |:.|.|...|                 ||.:|.:||        .|:..
Zfish    64 ESLSSDQ-HSCEEESTGE-----------------DNSLERRHD--------HEMDQ-------- 94

  Fly    93 CGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLS 157
                .:|..||..    ..:.....:|:|..||.||:..||:.|....|.....|.:||..:.|:
Zfish    95 ----QKPQSCSFE----DSNPKSSKKRSRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLT 151

  Fly   158 EARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQ-------LVPAPISNNMHKYANMPHPHPQPPP 215
            |.:|::||||||.|.:|.:.:..    |.|.|.       .|...:.|:..:|.....|.|..||
Zfish   152 ETQVKIWFQNRRYKTKRRQMAAE----LATTPTTTLAKRVAVKVLVRNDQRQYNTEDLPSPSVPP 212

  Fly   216 -----PPGAYALNFGP 226
                 |...|...|.|
Zfish   213 LYQSFPYYPYMFCFQP 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	23/55 (42%)
nkx3.3	NP_001013342.2	Homeodomain	112..168	CDD:459649	23/55 (42%)