DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Rhox8

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001020947.1 Gene:Rhox8 / 503423 RGDID:1561047 Length:178 Species:Rattus norvegicus


Alignment Length:75 Identity:33/75 - (44%)
Similarity:46/75 - (61%) Gaps:6/75 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LPAGGGHHSRKPR------RNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVW 164
            :|.....|...||      |||..|:..||..||::|||.|||.|..|.|||..:.::|:||:.|
  Rat   100 IPGSTKGHQASPRLPGQLSRNRHRFTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENW 164

  Fly   165 FQNRRAKFRR 174
            |::||||:|:
  Rat   165 FKSRRAKYRK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 29/61 (48%)
Rhox8NP_001020947.1 Homeodomain 119..174 CDD:459649 28/54 (52%)

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