Protein Alignment CG9876 and Hoxb5

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001178854.1
• Gene: Hoxb5 / 497987
• RGDID: 1562292
• Length: 269
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 46/191 - (24%)
• Similarity: 79/191 - (41%)
• Gaps: 38/191 - (19%)

  Fly     4 YQQQLHSLPVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEM 68
            ::|...|..:.:|.:.   |..:|:.:.:..|.:..|:....  ..|..|..:|...|..:..|
  Rat    85 FRQATSSCSLSSPESL---PCTNGDSHGAKPSASSPSDQATP--ASSSANFTEIDEASASSEPE- 143

  Fly    69 KHDAYSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGG---------------HHSRKP- 117
                    :.|.:|||   |:.|..    :|.|.:.:..|..|               |....|
  Rat   144 --------EAASQLSS---PSLARA----QPEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPD 193

  Fly   118 -RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER 177
             :|.||.::..|...|||.|....|.....|.|:|..:.|||.::::||||||.|::::.:
  Rat   194 GKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	22/55 (40%)
Hoxb5	NP_001178854.1	PRK07003	<67..>171	CDD:235906	21/106 (20%)
		Homeodomain	195..251	CDD:459649	22/55 (40%)