Protein Alignment CG9876 and hoxa5

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001011405.1
• Gene: hoxa5 / 496880
• XenbaseID: XB-GENE-486061
• Length: 274
• Species: Xenopus tropicalis
• Alignment Length: 216
• Identity: 43/216 - (19%)
• Similarity: 75/216 - (34%)
• Gaps: 59/216 - (27%)

  Fly    11 LPVGNPGNFYYGPTVSGEIYSSHQSHNLE-----------------------SEDKLEDREESGR 52
            |.||...:.::........|.|:.|.:.|                       :...:.|..:.|:
 Frog    54 LSVGRSASNHFSANDRARNYPSNPSSSTEPRYNQPAASAHSPPPDPLPCTAVATSPVSDSHQGGK 118

  Fly    53 NLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFGPTGAGC-GGADRPAPCSGNLPAGGGHHSRK 116
            |          :|....:...:....:...|::....|.|. .||:..||.|.:..:.....|..
 Frog   119 N----------SITNSNNTTSNSSNSSTGTSTHINRDGLGASSGAEDDAPASSDQASSQNSQSPA 173

  Fly   117 P-------------------------RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHL 156
            |                         :|.||.::..|...|||.|....|.....|.|:|..:.|
 Frog   174 PSVQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 238

  Fly   157 SEARVQVWFQNRRAKFRRNER 177
            ||.::::||||||.|::::.:
 Frog   239 SERQIKIWFQNRRMKWKKDNK 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	22/55 (40%)
hoxa5	NP_001011405.1	Homeodomain	200..256	CDD:459649	22/55 (40%)