Protein Alignment CG9876 and Abd-B

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 227
• Identity: 60/227 - (26%)
• Similarity: 90/227 - (39%)
• Gaps: 52/227 - (22%)

  Fly     1 MLNYQQQLHSLPVGNPGNFYYGP------TVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHR 59
            |..|.......|||.    |:||      |.|....:::.:             |:.|::....|
  Fly   278 MFAYPYPETQFPVGQ----YWGPNYRPDQTTSAAAAAAYMN-------------EAERHVSAAAR 325

  Fly    60 FSVDNIMEMKHD--AYSK-GKMAMELSSNFGPTGAGCG---GADRPAPCSGNLPAGGGHH---SR 115
            .||:......::  .||. |.:....|.|:..:||..|   ||  ..||:   |..|.|.   ..
  Fly   326 QSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGA--VGPCT---PNPGLHEWTGQV 385

  Fly   116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVG 180
            ..|:.|..:|..|...|||.|....|.....|.|||..:.|:|.:|::||||||.|.::|.:...
  Fly   386 SVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQA 450

  Fly   181 SRTLLDTAPQLVPAPISNNMHKYANMPHPHPQ 212
            ::.             :||.:..:|  |.|.|
  Fly   451 NQQ-------------NNNNNSSSN--HNHAQ 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	23/55 (42%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	23/55 (42%)