Protein Alignment CG9876 and pax3

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: XP_012825755.1
• Gene: pax3 / 448464
• XenbaseID: XB-GENE-482740
• Length: 486
• Species: Xenopus tropicalis
• Alignment Length: 317
• Identity: 81/317 - (25%)
• Similarity: 122/317 - (38%)
• Gaps: 104/317 - (32%)

  Fly     5 QQQLHSLPVGNPGNFYYG----------------PTVSGEIYSSHQSHNLESEDKLE-DREESGR 52
            ::::......|||.|.:.                |:||..............|:.:| ||:|...
 Frog   116 EKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGDEEDIELDRKEQEE 180

  Fly    53 NLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKP 117
            : :|..:.|:|.|:..:..|..:.:...::.|                  ..:||.     .||.
 Frog   181 S-EKRAKHSIDGILRERAPASPESEEGSDIDS------------------EPDLPL-----KRKQ 221

  Fly   118 RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVGSR 182
            ||:||||::.||..||:.||||||||.:.|||||.:..|:||||||||.||||::|   :..|:.
 Frog   222 RRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR---KQAGAN 283

  Fly   183 TLL------------------------------DTAPQLVPAPISNNMHKYANMPHPHPQPPPPP 217
            .|:                              .:.||.|..| ||.:|:        |||.||.
 Frog   284 QLMAFNHLIPGAFPPAAMPALPTYQLSETSYQPTSIPQAVSDP-SNTVHR--------PQPLPPS 339

  Fly   218 GAYALNFGPLELRSCQNYTNCYGGFGSSGASGSGVCSFFGATNYCVAANYAKNAYPP 274
            ..:                  .....|:..|.|..|...|...:   ::|..:..||
 Frog   340 SVH------------------QSSLPSNPESSSAYCLPSGRHGF---SSYTDSFVPP 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	36/55 (65%)
pax3	XP_012825755.1	PAX	35..162	CDD:238076	7/45 (16%)
		Homeodomain	222..278	CDD:459649	37/58 (64%)
		Pax7	349..393	CDD:403540	7/30 (23%)