DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and ey

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:282 Identity:79/282 - (28%)
Similarity:109/282 - (38%) Gaps:88/282 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IYSSHQSHNLESEDKLEDREESG----RNLDKIHRFSVDNIMEMKHDAYSKG-KMAMELSSNFGP 88
            ::.:||:.....:.....|..||    .:|.:|...|..||..:  .||:.| .:|..||.....
  Fly   345 VHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASV--TAYASGPSLAHSLSPPNDI 407

  Fly    89 TGAGCGGADRPAPC---------------SGNLPAGGGHHS--------------------RKPR 118
            ......|..|..|.               |....:|.|.:|                    ||.:
  Fly   408 ESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQ 472

  Fly   119 RNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRT 183
            ||||:|::.|:.:|||.||||||||.|.||.||.|:.|.|||:||||.|||||:||.|:....| 
  Fly   473 RNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQR- 536

  Fly   184 LLDTAPQLVPAPISNNMHKYANMPHPHPQPPPPPGAYA----------LNFGPLELRSCQNYTNC 238
                                        :.|...||.|          |...|..|.:|.:..: 
  Fly   537 ----------------------------RTPNSTGASATSSSTSATASLTDSPNSLSACSSLLS- 572

  Fly   239 YGGFGSSGASGSGVCSFFGATN 260
                ||:|  |..|.:..|.::
  Fly   573 ----GSAG--GPSVSTINGLSS 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 36/55 (65%)
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 36/54 (67%)
Blue background indicates that the domain is not in the aligned region.

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