DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Rhox10

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001020021.1 Gene:Rhox10 / 434769 MGIID:3580249 Length:196 Species:Mus musculus


Alignment Length:189 Identity:47/189 - (24%)
Similarity:75/189 - (39%) Gaps:36/189 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YYGPTVSGEIYSSHQSHNLESEDKLEDREES---GRNLDKIHRFSVDNIMEMKHDAYSKGKMAME 81
            |||.:...|:..:      ||:.:...|...   ||.:..:|....|:....|:......:...|
Mouse    12 YYGVSFYEEVIMT------ESQQRAAARAAQCRFGRGVRDLHELGQDDHPTFKYTQTYSSETRKE 70

  Fly    82 LSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFV 146
            ..:.........|...|                   |.|...:::||:..|||.|:.|.||||..
Mouse    71 TQARPKEPEKAAGAVSR-------------------RSNSKKYTNAQMCELEKAFQETQYPDAHQ 116

  Fly   147 REELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPAPISNNMHKYAN 205
            |:.||..:.:.|.:|:.||:.:|||:||.::.:    ||..|    .:..|||.....|
Mouse   117 RKALAKLIDVDECKVKAWFKYKRAKYRRKQKEL----LLSNA----TSGTSNNFSAQMN 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 23/55 (42%)
Rhox10NP_001020021.1 Homeodomain 94..144 CDD:459649 21/49 (43%)

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