Protein Alignment CG9876 and ro

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 107
• Identity: 39/107 - (36%)
• Similarity: 50/107 - (46%)
• Gaps: 16/107 - (14%)

  Fly    88 PTGAGCGGADRPA---------PCSGNLPAGG----GHHSRK---PRRNRTTFSSAQLTALEKVF 136
            |.....|||..|.         |...:..||.    ....||   .||.|||||:.|...||..|
  Fly   146 PPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEF 210

  Fly   137 ERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERS 178
            .|..|.....|.|||..:.|:|.::::||||||||.:|.|::
  Fly   211 HRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKA 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	27/55 (49%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	24/51 (47%)