Protein Alignment CG9876 and abd-A

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 182
• Identity: 47/182 - (25%)
• Similarity: 68/182 - (37%)
• Gaps: 51/182 - (28%)

  Fly    44 LEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAM------ELSSNFGPTGAGCGGADR---- 98
            |||:..| |..|.:    :::...|...|.:..:.|.      ..:|......||..|.|.
  Fly   284 LEDKSCS-RYTDTV----MNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNA 343

  Fly    99 -PAPCSGNLPAGGGHHS-------RKP----------------------------RRNRTTFSSA 127
             ..|.||.:|..||...       |.|                            ||.|.|::..
  Fly   344 CTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRF 408

  Fly   128 QLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSV 179
            |...|||.|...||.....|.|:|..:.|:|.::::||||||.|.::..|:|
  Fly   409 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAV 460

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	23/55 (42%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	23/55 (42%)
		Abdominal-A	456..478	CDD:403567	2/5 (40%)