Protein Alignment CG9876 and ftz

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Alignment Length: 179
• Identity: 43/179 - (24%)
• Similarity: 74/179 - (41%)
• Gaps: 32/179 - (17%)

  Fly   107 PAGGGHHS------------RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEA 159
            |.|.|..:            :..:|.|.|::..|...|||.|....|.....|.::|..:.|||.
  Fly   232 PNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSER 296

  Fly   160 RVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPAPISNNMHKYANMPHPHPQPPPPPGAYALNF 224
            ::::||||||.|.:::      || ||::|:...|..:      |.:|..........||.::
  Fly   297 QIKIWFQNRRMKSKKD------RT-LDSSPEHCGAGYT------AMLPPLEATSTATTGAPSV-- 346

  Fly   225 GPLELRSCQNYTNCYGGFGSSGASGSGVCSFFGATNYCVAANYAKNAYP 273
             |:.:......|..|..:..|.:.|.|:.:.:....    .:...:|||
  Fly   347 -PVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQ----THQQYDAYP 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	21/55 (38%)
ftz	NP_477498.1	FTZ	1..248	CDD:397787	3/15 (20%)
		Homeodomain	255..311	CDD:459649	21/55 (38%)
		KLF1_2_4_N	<321..404	CDD:425360	14/83 (17%)