DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and zen

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:110 Identity:37/110 - (33%)
Similarity:56/110 - (50%) Gaps:7/110 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 NLPAGGGHHSR--KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQN 167
            |||:...|.|:  |.:|:||.|:|.||..||..|:...|.....|.|:|.::.|.|.:|::||||
  Fly    76 NLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQN 140

  Fly   168 RRAKFRRN-----ERSVGSRTLLDTAPQLVPAPISNNMHKYANMP 207
            ||.||:::     |....::.....|.|.....|...:..|:..|
  Fly   141 RRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDP 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 25/55 (45%)
zenNP_476793.1 Homeodomain 91..147 CDD:459649 25/55 (45%)

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