DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and toe

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster


Alignment Length:225 Identity:77/225 - (34%)
Similarity:98/225 - (43%) Gaps:58/225 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SKGKMAME-LSSNFGPT---------GAGCGGADRPAPCSGNL------PAGGGHHSRKP----- 117
            |.|.|:.. .|||...|         |:|||.:   :..||.|      |..|...||.|     
  Fly   303 SDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDS---SAGSGRLSLPALSPDSGSRDSRSPDADAN 364

  Fly   118 --------------------RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQ 162
                                ||||||||..||..|||.|:::|||....||:||.:..|||||||
  Fly   365 RMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQ 429

  Fly   163 VWFQNRRAKFRRNER--SVGSRTLLDTAPQLVPAPISNN-MHKYANMPHPHPQPPPPPGAYALNF 224
            |||.|||||:||::|  .:..|....|:..  |.|:.|. :...:.:|.|.|...|..|.....:
  Fly   430 VWFSNRRAKWRRHQRVNLIKQRDSPSTSSS--PTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPY 492

  Fly   225 GPLELRSCQNYTNCYGGFGSSGASGSGVCS 254
             |.   |..|..|.     ||.:|.|..|:
  Fly   493 -PY---STSNMCNT-----SSSSSNSQPCN 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 36/55 (65%)
toeNP_524041.2 HTH_ARSR 134..230 CDD:481197
Homeodomain 385..441 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

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