Protein Alignment CG9876 and Alx3

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001007013.2
• Gene: Alx3 / 365900
• RGDID: 1359270
• Length: 343
• Species: Rattus norvegicus
• Alignment Length: 324
• Identity: 94/324 - (29%)
• Similarity: 119/324 - (36%)
• Gaps: 143/324 - (44%)

  Fly     4 YQQQLHSLPVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEM 68
            |.|.|...||.|.|:||.|.:              |:|:|.
  Rat    71 YLQDLGPGPVLNGGHFYKGSS--------------EAEEKA------------------------ 97

  Fly    69 KHDAYSKGKMAMELSSNFGPTGAGCGGADR---------PAPCSGNL--PAGGG--------HHS 114
                 ||       :::|......|.|..|         |.||..:|  |...|        ...
  Rat    98 -----SK-------AASFPQLPVDCRGGPRDGPSNVQGSPGPCLASLSVPLSPGLPDSMELAKSK 150

  Fly   115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER-- 177
            .|.||||||||:.||..|||||::|||||.:.||:||.:..|:||||||||||||||:|:.||
  Rat   151 SKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYG 215

  Fly   178 ---------------SVGSRTLLDTAPQL-----------------------VPAP-ISNNMHKY 203
                           ||..||  |:.|||                       :|:| :|...|.:
  Rat   216 KIQEGRNPFTTAYDISVLPRT--DSHPQLQNSLWSSPGSGSPGGPCLMPPEGIPSPCMSPYSHSH 278

  Fly   204 ANM-----------PHP--------------HPQPPPPPGAY------ALNFGPLELRSCQNYT 236
            .|:           .||              |...|.|.|.|      :|...|.|..|..|:|
  Rat   279 GNVAGFMGVPASPAAHPGIYSIHGFPPALGGHSFEPSPDGDYKSPSLVSLRMKPKEPPSLLNWT 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	39/55 (71%)
Alx3	NP_001007013.2	Homeodomain	154..210	CDD:459649	39/55 (71%)