Protein Alignment CG9876 and Phox2b

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001414175.1
• Gene: Phox2b / 364152
• RGDID: 1560582
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 77/215 - (35%)
• Similarity: 91/215 - (42%)
• Gaps: 76/215 - (35%)

  Fly    82 LSSNFGPTGAGCGGADRPAPCS-GNL-----------------PAGGGHHSRKPRRNRTTFSSAQ 128
            :.:.||.| :||... .|..|| |.|                 ..||.:..||.||.||||:|||
  Rat    47 IRTTFGAT-SGCPSL-TPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQ 109

  Fly   129 LTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVG------------- 180
            |..||:||..|||||.:.|||||.|:.|:||||||||||||||||:.||:..
  Rat   110 LKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGSSGK 174

  Fly   181 ---------SRTLLDTAPQLVPAPISNNMHKYANMPHPHPQPPPPPGAYALNFGPLELRSCQNYT 236
                     |:....|.|.....            |.|:|.|.|..||
  Rat   175 KSDSSRDDESKEAKSTDPDSTGG------------PGPNPNPTPSCGA----------------- 210

  Fly   237 NCYGGFGSS-----GASGSG 251
            |..||.|.|     ||:|.|
  Rat   211 NGGGGGGPSPAGAPGAAGPG 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	41/55 (75%)
Phox2b	NP_001414175.1	Homeodomain	99..155	CDD:459649	41/55 (75%)