DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9876 and unpg

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:314 Identity:85/314 - (27%)
Similarity:122/314 - (38%) Gaps:100/314 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQQLHSLPV-----------------GNPG----------NFYYGPTVSGEIYSSHQSHNLESED 42
            |..:|||.|                 .|||          ..:..|..||       ||: ..|.
  Fly   183 QDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSG-------SHS-PMEP 239

  Fly    43 KL-----EDREESGRNLDKI--------HRFSVDNIMEMKHDAYSKGKMAMELSSNFGP----TG 90
            .|     ||.|.||.:...|        :...:|   :.::.||:... :.:.|.:.|.    .|
  Fly   240 ALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMD---KSRNGAYTNSD-SEDCSDDEGAQSRHEG 300

  Fly    91 AGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVH 155
            .|.||.|    ..||    |...:.|.||.||.|:|.||..||:.|....|.....|.::||.:.
  Fly   301 GGMGGKD----SQGN----GSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLK 357

  Fly   156 LSEARVQVWFQNRRAKFRRNERSVGSRTL---LDTAPQLVPAPISNNMHKYANMPHPHPQ----- 212
            |||.:|::||||||||::|.:..:.|..|   ..|:...:..||..:::::| :...|.|     
  Fly   358 LSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFA-VRSQHQQLEKMC 421

  Fly   213 ---PPPPPGAYALNFGPLELRSCQNYTNCYGGF----GSSGAS-------GSGV 252
               |.|            :||. :......|||    ||:.||       |.||
  Fly   422 LSGPKP------------DLRK-KLSAEAIGGFEKFSGSTNASSPSGGPVGLGV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 27/55 (49%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 24/51 (47%)

Return to query results.
Submit another query.