Protein Alignment CG9876 and cad

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Alignment Length: 264
• Identity: 69/264 - (26%)
• Similarity: 99/264 - (37%)
• Gaps: 80/264 - (30%)

  Fly     3 NYQQQ----LHSLPVGNPGNFYYGPTVSGEIYSS------------HQSHNLESEDKLEDREESG 51
            |:||.    |.|.|:          ||||...||            |.:|:|.:.....:...:.
  Fly   169 NHQQHIAEGLPSPPI----------TVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNN 223

  Fly    52 RNLDKIH-----RFSVDNIME-----------MKHDAYSKGKMAMELSSNFGPTGAGCGGADRPA 100
            .|....|     ..||.|...           ||..|| ..:...:|||           :....
  Fly   224 NNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAY-PAQPQPDLSS-----------SPNLE 276

  Fly   101 PCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWF 165
            ..|..|.|.|  .:|...:.|..::..|...|||.:..:.|.....:.|||..:.|||.:|::||
  Fly   277 DLSDLLDASG--KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWF 339

  Fly   166 QNRRAKFRR--------NERSVGSR-----TLLDTAPQLVPA-----PISNNMHKYA--NMP--- 207
            ||||||.|:        |...||.:     .|||...:|.|.     .::::|:..|  |:|
  Fly   340 QNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMR 404

  Fly   208 -HPH 210
             |||
  Fly   405 LHPH 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	21/55 (38%)
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	21/54 (39%)