DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and VSX2

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_878314.1 Gene:VSX2 / 338917 HGNCID:1975 Length:361 Species:Homo sapiens


Alignment Length:85 Identity:18/85 - (21%)
Similarity:30/85 - (35%) Gaps:27/85 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TFEKVLSLLTPLLRKYHNDTRKDLNVLFFPCFQFGSKESPDEIVQRFESS-------------TD 96
            ||.::|: ..|.:.::||             |.:|.:...|.:..|..|.             |.
Human   276 TFREILT-RRPFVSEFHN-------------FLYGMQLHTDYLQNRQFSMWKDTVLDTFPNQLTQ 326

  Fly    97 SSGMIGEIFTEIEVNGSKAP 116
            .:..:..:.|...||.|.||
Human   327 FAKHLNLLDTAFFVNSSYAP 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649
VSX2NP_878314.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..151
Homeodomain 153..205 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..300 8/37 (22%)
OAR 300..318 CDD:461067 3/17 (18%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317 2/12 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..361 7/34 (21%)
Blue background indicates that the domain is not in the aligned region.

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