DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and prrx1b

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_017207930.1 Gene:prrx1b / 337089 ZFINID:ZDB-GENE-030131-9033 Length:267 Species:Danio rerio


Alignment Length:257 Identity:86/257 - (33%)
Similarity:124/257 - (48%) Gaps:64/257 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SSHQSHNLESEDKLEDREESG-----RNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFGPTG 90
            :|..:|.::.:..:..|.||.     .||.....|||.::::::.   ::..:..::..:.|.||
Zfish     2 TSSYAHVMDRQATISSRLESPITANLENLQAKKNFSVSHLLDLEE---AREMVGSQVDESVGETG 63

  Fly    91 AGCGGADRPAPCSGNLPAGGG-------------HHSRKPRRNRTTFSSAQLTALEKVFERTHYP 142
                   |....|..|.:|..             ...||.|||||||:|:||.|||:||||||||
Zfish    64 -------RTMLESPGLTSGSDTTQQENEQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYP 121

  Fly   143 DAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSV-------------GSRTLLDTAPQLVPA 194
            ||||||:||.:|:|:||||||||||||||||||||::             |..|.::......||
Zfish   122 DAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQPIVPRPA 186

  Fly   195 PISNNMHKYANMPHPHPQPPPPPGAYALNFGPLEL----------------RSCQNYTNCYG 240
            |..|:...:.:.. |:...|.|.|      ||:.:                .:|.|.|:..|
Zfish   187 PRPNDYLSWGSAA-PYSWYPRPEG------GPMRVPQKMLPTESNTMATYPPTCANTTSTQG 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 46/55 (84%)
prrx1bXP_017207930.1 Homeodomain 101..153 CDD:459649 42/51 (82%)
OAR 242..259 CDD:461067 86/257 (33%)

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