Protein Alignment CG9876 and Gsc

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 329
• Identity: 74/329 - (22%)
• Similarity: 105/329 - (31%)
• Gaps: 149/329 - (45%)

  Fly     2 LNYQQQLHSLPVGNPGNF-----------------YYGPTVSGEIYSSHQSHNLESEDKL---ED 46
            |..|||.......:|||.                 |.|..:...:...|..|. :|:.:.   :|
  Fly    78 LGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQQQHAQHQ-QSQSQTPSSDD 141

  Fly    47 REESGRNLDKIHR---------FSVDNIMEMKHD----AYSKGKMAME------LSSNFGPTGAG 92
            ..:||..:.:..|         |::|:|:..:..    |.|:|.....      |:||....|..
  Fly   142 GSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLK 206

  Fly    93 CGGADRPAPCSGN--------------LPA----------------------------------- 108
            ..||:.||..:.|              :||
  Fly   207 RSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFY 271

  Fly   109 -----------------------------GGGHHSRKP--------------------------- 117
                                         |.|||...|
  Fly   272 PNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPP 336

  Fly   118 ----RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERS 178
                ||:||.|:..||..||..|::|||||..:||:||.||.|.|.||:|||:|||||:|:.:|.
  Fly   337 PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKRE 401

  Fly   179 VGSR 182
            ...|
  Fly   402 EQER 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	33/55 (60%)
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	33/55 (60%)