DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Pph13

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster


Alignment Length:147 Identity:57/147 - (38%)
Similarity:73/147 - (49%) Gaps:49/147 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
            |...||.||.||||::.||..||:.|:||||||.|.|||||.::.|:||||||||||||||:|:.
  Fly     4 GTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQ 68

  Fly   176 ER----------------------SV---------GSRTLL-DTAPQ-----------------L 191
            |:                      :|         |..||| ||.||                 :
  Fly    69 EKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAM 133

  Fly   192 VPAPISNNMHKYANMPH 208
            .|:.:|.|:....|:.|
  Fly   134 SPSRLSPNIFLNLNIDH 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 38/55 (69%)
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 38/55 (69%)

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