DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and HOXD3

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:298 Identity:68/298 - (22%)
Similarity:102/298 - (34%) Gaps:108/298 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKG 76
            |.|.|.......|:|.:|:..              .:||.:|                    ||.
Human   143 PKGGPNASSSSATISKQIFPW--------------MKESRQN--------------------SKQ 173

  Fly    77 KMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHY 141
            |      ::....|..|.....|.|.|              :|.||.::||||..|||.|....|
Human   174 K------NSCATAGESCEDKSPPGPAS--------------KRVRTAYTSAQLVELEKEFHFNRY 218

  Fly   142 PDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVG------SRTLLDTAP----------- 189
            .....|.|:|..::|:|.::::||||||.|:::::::.|      |::...:.|           
Human   219 LCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYS 283

  Fly   190 -QLVPAPISNNMHKYANMPHPHPQPP----PPPGAYALNFGPLELRSCQNYTNCY---------- 239
             ||.|.|         .:.:..|.||    ..|..|.|......|.||......|          
Human   284 GQLPPVP---------GLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPM 339

  Fly   240 ----GGFGSSGASGSGVCSFFGATNYCVAANYAKNAYP 273
                |||.|:...||.|         .|..|:.::..|
Human   340 ASNGGGFASANLQGSPV---------YVGGNFVESMAP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 24/55 (44%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 17/107 (16%)
Antp-type hexapeptide 160..165 1/18 (6%)
Homeodomain 195..251 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 3/26 (12%)
DUF4074 369..430 CDD:463833 68/298 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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