DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and HOXB3

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_016880049.1 Gene:HOXB3 / 3213 HGNCID:5114 Length:578 Species:Homo sapiens


Alignment Length:243 Identity:70/243 - (28%)
Similarity:102/243 - (41%) Gaps:55/243 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KGKMAMELSSNFGPTGAGC-----GGADRPAPCSGNLPAGGGHHSRKP------RRNRTTFSSAQ 128
            :.:...:|.:|...|..||     ||....:..||....|||...:.|      :|.||.::|||
Human   282 ESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQ 346

  Fly   129 LTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER------SVGSRTLLDT 187
            |..|||.|....|.....|.|:|..::|||.::::||||||.|::::::      |.|..:...:
Human   347 LVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 411

  Fly   188 APQLV--PAPISNNMHKYANMPHPHPQPPPP------PGAYAL--NFGPLELRSC---QNYTNC- 238
            .||.:  .|...|.:|   :|...:..|.||      ..||||  |:.| .|:.|   |.|... 
Human   412 PPQPMQSTAGFMNALH---SMTPSYESPSPPAFGKAHQNAYALPSNYQP-PLKGCGAPQKYPPTP 472

  Fly   239 ---Y---------GGFGSSGASGSGVCSFFGATNYCVAANYAKNAYPP 274
               |         |.:|:....||.|        |.....||....||
Human   473 APEYEPHVLQANGGAYGTPTMQGSPV--------YVGGGGYADPLPPP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 25/55 (45%)
HOXB3XP_016880049.1 Homeodomain 336..392 CDD:459649 25/55 (45%)
DUF4074 513..576 CDD:463833 70/243 (29%)

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