DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and HOXA6

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:201 Identity:53/201 - (26%)
Similarity:84/201 - (41%) Gaps:61/201 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YQQQLHSLPVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNL----------DKIH 58
            :.||.:|:...|..::.||.:.   .||              |::.||.:.          |.:|
Human    57 FYQQSNSVLACNRASYEYGASC---FYS--------------DKDLSGASPSGSGKQRGPGDYLH 104

  Fly    59 RFSVDNIMEMKHDAYS-KGKMAMELSSNFGPTGAGCGGADR--PAP----------CSGNLPAGG 110
             ||.:  .:.|.|:.| :||...:            .||||  .:|          |:|   |..
Human   105 -FSPE--QQYKPDSSSGQGKALHD------------EGADRKYTSPVYPWMQRMNSCAG---AVY 151

  Fly   111 GHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
            |.|.   ||.|.|::..|...|||.|....|.....|.|:|..:.|:|.::::||||||.|:::.
Human   152 GSHG---RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213

  Fly   176 ERSVGS 181
            .:.:.|
Human   214 NKLINS 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 22/55 (40%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 9/52 (17%)
Antp-type hexapeptide 136..141 0/4 (0%)
Homeodomain 156..212 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 1/6 (17%)

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