DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and HOXA3

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_109377.1 Gene:HOXA3 / 3200 HGNCID:5104 Length:443 Species:Homo sapiens


Alignment Length:191 Identity:60/191 - (31%)
Similarity:85/191 - (44%) Gaps:40/191 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 TGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATK 153
            :|..|.| |:..|         |..|.|  |.||.::||||..|||.|....|.....|.|:|..
Human   175 SGESCAG-DKSPP---------GQASSK--RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANL 227

  Fly   154 VHLSEARVQVWFQNRRAKFRRNERSVGSRTLL-DTAPQLVPAP-----ISNNMHKYAN-MPHPHP 211
            ::|:|.::::||||||.|::::::..|..|.. ..:|...|.|     ..|:||...| :|:...
Human   228 LNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQ 292

  Fly   212 QPP----PPPGAYALNFG--PLELRSC-------QNYTNCYGGFGSS--------GASGSG 251
            .||    ||.|.|.|...  |..|.||       :.||....|.|.:        |..|:|
Human   293 SPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHGLQGNG 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 24/55 (44%)
HOXA3NP_109377.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..147
Antp-type hexapeptide 155..160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..196 9/32 (28%)
Homeodomain 192..248 CDD:459649 25/57 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..338 24/90 (27%)
DUF4074 377..441 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..443
Blue background indicates that the domain is not in the aligned region.

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