Protein Alignment CG9876 and oc

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Alignment Length: 117
• Identity: 50/117 - (42%)
• Similarity: 63/117 - (53%)
• Gaps: 25/117 - (21%)

  Fly    83 SSNFGPTGAGCGG-------------ADRPAPCSG--NLPAG----------GGHHSRKPRRNRT 122
            |.:.||.....||             ...|.|..|  .||.|          .|.::||.||.||
  Fly     8 SGDLGPHPHSYGGPHPHHSVPHGPLPPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERT 72

  Fly   123 TFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 174
            ||:.|||..||.:|.:|.|||.|:|||:|.|::|.|:||||||:|||||.|:
  Fly    73 TFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	35/55 (64%)
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	35/54 (65%)