DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9876 and dlx3b

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_571397.2 Gene:dlx3b / 30585 ZFINID:ZDB-GENE-980526-280 Length:269 Species:Danio rerio


Alignment Length:269 Identity:62/269 - (23%)
Similarity:97/269 - (36%) Gaps:84/269 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSKGKMAMELSSNFG 87
            |.:|.::..|...|. .|:|.....|.|..::         ......|:.|.......:::|...
Zfish    11 PGISTDLSGSMSCHP-TSKDSPTLPESSATDM---------GYYSSHHEYYQSPPYPQQMNSYHQ 65

  Fly    88 PTGAGCGGADRPAPCSGNLPAGG----GHHSR-----------------------KP---RRNRT 122
            ...:|.|......|.....|...    ||::|                       ||   |:.||
Zfish    66 FNLSGMGATPGAYPTKTEYPYNTYRQYGHYNRDLQTPPQSAVKEEPETEVRMVNGKPKKIRKPRT 130

  Fly   123 TFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDT 187
            .:||.||.||::.|::..|.....|.|||.::.|::.:|::||||||:||::..::  ....|:.
Zfish   131 IYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKN--GEVPLEH 193

  Fly   188 APQL----------VPAPISNNMHK----------------------YAN--------MPHP--H 210
            :|..          .||...||.|.                      |:|        :.||  |
Zfish   194 SPNASDSMACNSPPSPAVWDNNAHSSQVNRGQIPQPPLSSTPPYMEDYSNHWYQQGSHLQHPVHH 258

  Fly   211 PQPPPPPGA 219
            |.||...||
Zfish   259 PGPPQSVGA 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 25/55 (45%)
dlx3bNP_571397.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 8/30 (27%)
DLL_N 28..104 CDD:463567 13/84 (15%)
Homeodomain 126..182 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..242 7/50 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..269 8/18 (44%)

Return to query results.
Submit another query.