DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and otx2b

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_571326.1 Gene:otx2b / 30501 ZFINID:ZDB-GENE-980526-406 Length:289 Species:Danio rerio


Alignment Length:213 Identity:67/213 - (31%)
Similarity:95/213 - (44%) Gaps:43/213 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 MKHDAYSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTAL 132
            :|...|:...:::..|           |.|...|..| .||    ..||.||.||||:.|||..|
Zfish     5 LKQPPYTVNGLSLTTS-----------GMDLLHPSVG-YPA----TPRKQRRERTTFTRAQLDVL 53

  Fly   133 EKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFR---RNERSVGSRTLLDTAPQLVPA 194
            |.:|.:|.|||.|:|||:|.|::|.|:||||||:|||||.|   :.:::.|...:.....:..||
Zfish    54 EALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKSSPA 118

  Fly   195 PISNNMHKYANMPHPHPQPPPP-------------PGAYALNFGPLEL-RSC------QNYTNCY 239
            ..:::....:....|......|             |.:.:....||.. .||      ..||...
Zfish   119 REASSESGASGQFTPPSSTSVPAISTTTAPVSIWSPASISPLSDPLSTSSSCMQRSYPMTYTQAS 183

  Fly   240 GGFGSSGASGSGVCSFFG 257
            |  .|.|.:||  .|:||
Zfish   184 G--YSQGYAGS--TSYFG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 36/58 (62%)
otx2bNP_571326.1 Homeodomain 39..94 CDD:459649 35/54 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..142 6/48 (13%)
TF_Otx 153..234 CDD:427350 15/49 (31%)

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