Protein Alignment CG9876 and rx2

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_571301.2
• Gene: rx2 / 30473
• ZFINID: ZDB-GENE-990415-237
• Length: 327
• Species: Danio rerio
• Alignment Length: 274
• Identity: 84/274 - (30%)
• Similarity: 113/274 - (41%)
• Gaps: 88/274 - (32%)

  Fly     7 QLHSLPVGNPGNFYYGPTVSGEIYSSHQSHNLE-------SEDKLEDREESGRNLDKIHRFSVDN 64
            ::||:.|           :.|  :|..|...||       .||:||::|:...:....|....|.
Zfish    35 RVHSIDV-----------ILG--FSKDQDPLLEPIGTHKVDEDQLEEQEKQVNSDPYSHLQIPDQ 86

  Fly    65 IMEMK---HDA--YSKGKMAMELS---SNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNR 121
            ..:.:   ||.  :|..|...:|.   ||...........|...|            .:|.||||
Zfish    87 TQQQQSVYHDTGLFSTDKCDADLGDPRSNVESDSRSPDIPDEDQP------------KKKHRRNR 139

  Fly   122 TTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER-SVGSRTLL 185
            |||::.||..||:.||::||||.:.|||||.||:|.|.||||||||||||:||.|: ..|:..|.
Zfish   140 TTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKMDTGTMKLH 204

  Fly   186 DT------APQLVP--APISNN----------------MHKYANMPHP----------HP----- 211
            |:      .|.:.|  .|:||:                ||.......|          ||
Zfish   205 DSPIRSFNRPPMAPNVGPMSNSLPLDPWLSSPLSSATPMHSIPGFMGPGQSLQPTYTAHPGFLNT 269

  Fly   212 --------QPPPPP 217
                    ||.|||
Zfish   270 SPGMMQNMQPMPPP 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	38/55 (69%)
rx2	NP_571301.2	Octapeptide motif	37..44		3/17 (18%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..73		8/24 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	100..139		10/50 (20%)
		Homeodomain	136..192	CDD:459649	38/55 (69%)
		OAR	302..316	CDD:461067
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	304..317
		Nuclear localization signal. /evidence=ECO:0000255	310..314