Protein Alignment CG9876 and rx1

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_571300.2
• Gene: rx1 / 30472
• ZFINID: ZDB-GENE-990415-236
• Length: 330
• Species: Danio rerio
• Alignment Length: 295
• Identity: 88/295 - (29%)
• Similarity: 119/295 - (40%)
• Gaps: 103/295 - (34%)

  Fly     7 QLHSLPV--G---------NPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRF 60
            ::||:.|  |         |||.......|.||        :|....||:.|.:...:|..:...
Zfish    35 RVHSIDVILGFNKDQDSLLNPGANAVAHKVGGE--------SLGEPGKLDQRVQPYGHLPPLRDG 91

  Fly    61 SVDNIMEMKHDAYSKGKMAMELSSNFGPTGAGCGG----------ADRPAPCSGNLPAGGGHHSR 115
            |.....   |||        ::.||      .|.|          :|..:|.|    |.|....:
Zfish    92 SEQPTF---HDA--------DMFSN------KCDGDLGDLRKAIESDSKSPDS----ADGEQPKK 135

  Fly   116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVG 180
            |.|||||||::.||..||:.||::||||.:.|||||.||:|.|.||||||||||||:||.|:...
Zfish   136 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKIDA 200

  Fly   181 SRTLLDTAPQL-----------------------VPAPISNNM---------------------H 201
            |...|..:|.|                       :|:|:|:..                     |
Zfish   201 STMKLHDSPMLSFNRPSMHPTVGPMNNSLPLDPWLPSPLSSATPVHSIPGFMGPTQGLQTGYPGH 265

  Fly   202 KYANMPHP-----HPQPPPP---PGAYALNFGPLE 228
            .:.:.|.|     .|..|||   |..:...: |||
Zfish   266 SFLSPPQPMAQSMQPMAPPPYQCPPPFTDKY-PLE 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	38/55 (69%)
rx1	NP_571300.2	Octapeptide motif	37..44		3/6 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	66..104		11/56 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	118..142		9/27 (33%)
		Homeodomain	138..194	CDD:459649	38/55 (69%)
		OAR	302..318	CDD:461067
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	306..319
		Nuclear localization signal. /evidence=ECO:0000255	312..316