DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and otx2a

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_073764513.1 Gene:otx2a / 30462 ZFINID:ZDB-GENE-980526-27 Length:364 Species:Danio rerio


Alignment Length:204 Identity:67/204 - (32%)
Similarity:98/204 - (48%) Gaps:29/204 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 HRFS--VDNIME---MKHDAYSKGKMAMELSSNFGPTGAGCGGA--DRPAPCSGNLPAGGGHHSR 115
            |:|:  .:||.|   .|...:|...|:....:.:...|.|.|||  |...|..| .|.    :.|
Zfish     3 HKFTDLKENITEDQDKKVSPWSSTMMSYLKQAPYAMNGLGLGGATMDLLHPSVG-YPT----NPR 62

  Fly   116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVG 180
            |.||.||||:..||..||.:|.:|.|||.|:|||:|.|::|.|:||||||:|||||.|:.::...
Zfish    63 KQRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSS 127

  Fly   181 SRTLLDTAPQLVPAPISNNMHKYANMPHPHPQPPPPPGAYALNFGPLELRSCQNYTNCYGGFGSS 245
            :.:.:..|.:                 .|.|....|....:.:|.|..:.|..:.::...|...|
Zfish   128 TNSKIRPAKK-----------------KPSPSRESPGSESSGHFTPPAVSSSSSSSSSSSGSNPS 175

  Fly   246 GASGSGVCS 254
            ..||.|:.|
Zfish   176 ALSGVGLIS 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 34/55 (62%)
otx2aXP_073764513.1 None

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