Protein Alignment CG9876 and hoxc4a

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Alignment Length: 223
• Identity: 55/223 - (24%)
• Similarity: 85/223 - (38%)
• Gaps: 46/223 - (20%)

  Fly    21 YGPTVSGEIY-----SSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAY--SKGKM 78
            |.|..|.|.|     |.:|.|:.|........:|...|...|..........:.|..:  .||:.
Zfish    28 YIPEHSPEYYSRARDSGYQHHHQELYPPRASYQERQYNCASIPEPDTQRGHGLPHAGHLLGKGQS 92

  Fly    79 A------MELS-SNFGPTGAGCGGADRPAP---CSGNLP-------------AGGGHHSRKPRRN 120
            |      :.|| :......:.|..|....|   .|...|             ....::..:|:|:
Zfish    93 ASCEPPPLPLSPATPSAASSACNQATPEHPNSSASAKQPVVYPWMKKIHVSTVNSSYNGAEPKRS 157

  Fly   121 RTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER-------- 177
            ||.::..|:..|||.|....|.....|.|:|..:.|||.::::||||||.|::::.|
Zfish   158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRS 222

  Fly   178 ------SVGSRTLLDTAPQLVPAPISNN 199
                  |.||.|  .:|..:|.|..:.|
Zfish   223 SSSTGISSGSNT--SSAAGVVAAASTTN 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	22/55 (40%)
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		10/58 (17%)
		Antp-type hexapeptide	133..138		0/4 (0%)
		Homeodomain	155..211	CDD:459649	22/55 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		9/39 (23%)